SBML model for Mycobacterium-tuberculosis-CDC1551
Citations
D. Segre, J. Zucker, J. Katz, X. Lin, P. D'haeseleer, W. Rindone, P. Kharchenko, D. Nguyen, M. Wright, G. Church
"From annotated genomes to metabolic flux models and kinetic parameter fitting,"
OMICS 7:3 301-317 2003
P. Karp, S. Paley, and P. Romero
"The Pathway Tools Software,"
Bioinformatics 18:S225-32 2002
Description
The MTBCDC model was generated from the Organism-specific Pathway/Genome database
Reaction Reaction Equation
EC# 3.6.1.34H+[cytoplasm] + H2O + ATP =H+[periplasm] + phosphate + ADP
OCTAPRENYL-METHYL-METHOXY-BENZOQ-OH-RXN2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinone + O2 = 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinone
2-OCTAPRENYL-6-OHPHENOL-METHY-RXN2-octaprenyl-6-hydroxyphenol + S-adenosyl-L-methionine = 2-octaprenyl-6-methoxyphenol + S-adenosyl-homocysteine
2-OCTAPRENYLPHENOL-HYDROX-RXN2 2-octaprenylphenol + O2 = 2 2-octaprenyl-6-hydroxyphenol
RXN0-2772-C-methyl-D-erythritol-4-phosphate + CTP = 4-diphosphocytidyl-2-C-methylerythritol + pyrophosphate
EC# 2.7.-.-4-diphosphocytidyl-2-C-methylerythritol + ATP = 4-diphosphocytidyl-2-C-methylerythritol 2-phosphate + ADP
RXN0-3024-diphosphocytidyl-2-C-methylerythritol 2-phosphate = 2-C-methyl-D-erythritol-2,4-cyclodiphosphate + CMP
RXN0-743N5-carboxyaminoimidazole ribonucleotide = phosphoribosyl-carboxy-aminoimidazole
RXN0-7425'-phosphoribosyl-5-aminoimidazole + ATP + H2O + CO2 = N5-carboxyaminoimidazole ribonucleotide + ADP + phosphate
RXN1F-93dihydrokaempferol = kaempferol
RXN-527dihydroquercetin + NADH = quercetin + NAD
RXN1F-462quercetin + UDP-D-glucose = quercetin-3-glucoside + UDP
RXN-1541naringenin = isoflavone
RXN1K-872-hydroxyhepta-2,4-dienedioate = 2-oxo-hept-3-ene-1,7-dioate
2-OCTAPRENYL-METHOXY-BENZOQ-METH-RXN2-octaprenyl-6-methoxy-1,4-benzoquinone + S-adenosyl-L-methionine = 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinone + S-adenosyl-homocysteine
HEXENEDIOATE-AUTOTRANSFORMATION-RXN4-Carboxy-2-hydroxyhexa-2,4-dienedioate = 4-Carboxy-2-oxo-3-hexenedioate
EC# 1.1.-.-2,5-dichloro-2,5-cyclohexadiene-1,4-diol + NAD = 2,5-dichlorohydroquinone + NADH + H+
LIND-RXN2,5-dichlorohydroquinone + 2 reduced glutathione = chlorohydroquinone + oxidized glutathione + HCl
LINE-RXNchlorohydroquinone + O2 + H2O = maleylacetate + HCl
LINABSPON-RXN1,3,4,6-tetrachloro-1,4-cyclohexadiene = HCl + 1,2,4-trichlorobenzene
LINBBSPON-RXN2,4,5-trichloro-2,5-cyclohexadiene-1-ol = 2,5-dichlorophenol + HCl
EC# 1.2.-.-2-chloroacetaldehyde + H2O + NAD = chloroacetic acid + NADH + H+
GDPPYPHOSKIN-RXNATP + GDP = AMP + guanosine 5'-diphosphate,3'-diphosphate
EC# 1.8.-.-CH3-S-CoM + H-S-CoB = CoM-S-S-CoB + methane
PDXA-RXNphospho-hydroxy-threonine + NAD = 1-amino-propan-2-one-3-phosphate + NADH + CO2
PDXJ-RXN1-amino-propan-2-one-3-phosphate + deoxyxylulose-5-phosphate = pyridoxine-5'-phosphate
LUMAZINESYN-RXN3,4-dihydroxy-2-butanone-4-P + 5-amino-6-ribitylamino-2,4(1H,3H)-pyrimidinedione = 6,7-dimethyl-8-(1-D-ribityl)lumazine + phosphate
RIBOPHOSPHAT-RXN5-amino-2,6-dioxy-4-(5'-phosphoribitylamino)pyrimidine + H2O = 5-amino-6-ribitylamino-2,4(1H,3H)-pyrimidinedione + phosphate
DIOHBUTANONEPSYN-RXNribulose-5-phosphate = 3,4-dihydroxy-2-butanone-4-P + formate
RIBOFLAVINSYNREDUC-RXNNADPH + H+ + 5-amino-6-(ribosylamino)-2,4-(1H,3H)-pyrimidinedione 5'-phosphate = NADP + 5-amino-2,6-dioxy-4-(5'-phosphoribitylamino)pyrimidine
RIBOFLAVINSYNDEAM-RXNH2O + 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine = NH3 + 5-amino-6-(ribosylamino)-2,4-(1H,3H)-pyrimidinedione 5'-phosphate
PYRIMSYN1-RXN5'-phosphoribosyl-5-aminoimidazole = 4-amino-5-hydroxymethyl-2-methylpyrimidine-phosphate
COBINAMIDEKIN-RXNadenosylcobinamide + ATP = adenosylcobinamide-P + ADP
HOMOSERDEAM-RXN2-oxobutanoate + NH3 = homoserine
METBALT-RXN2-oxobutanoate + succinate + NH3 = O-succinyl-L-homoserine + H2O
THREOSPON-RXN2-amino-3-oxobutanoate = aminoacetone + CO2
AMACETOXID-RXNaminoacetone + H2O + O2 = methyl-glyoxal + NH3 + H2O2
DURIDKI-RXNDeoxyuridine + ATP = dUMP + ADP
URA-PHOSPH-RXNphosphate + Deoxyuridine = deoxy-ribose-1-phosphate + uracil
THTOREDUCT-RXNtetrahydrothiophene 1-oxide + reduced acceptor = tetrahydrothiophene + acceptor
FORMYLTHFGLUSYNTH-RXN10-formyl-THF(glu)n + L-glutamate + ATP = 10-formyl-THF(glu)n+1 + ADP + phosphate
GCVMULTI-RXNL-glycine + THF + NAD = NH3 + CO2 + 5,10-methylene-THF + NADH + H+
PYRAMKIN-RXNATP + pyridoxamine = ADP + pyridoxamine 5'-phosphate
PNPOXI-RXNO2 + pyridoxine-5'-phosphate = H2O2 + pyridoxal 5'-phosphate
SPONTPRO-RXNL-glutamate γ-semialdehyde = H2O + L-Δ1-pyrroline-5-carboxylate
O-SUCCINYLBENZOATE-COA-SYN-RXN2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate = O-succinylbenzoate + H2O
SHCHCSYNTH-RXNisochorismate + succinate-semialdehyde-thiamine PPi = 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate + pyruvate + CO2
EC# 2.7.1.-cytidine + GTP = CMP + GDP
EC# 2.4.2.-guanine + PRPP = pyrophosphate + GMP
DEOXYGUANPHOSPHOR-RXNguanine + deoxy-ribose-1-phosphate = deoxyguanosine + phosphate
GUANOSINEKIN-RXNguanosine + ATP = GMP + ADP
DEOXYADENPHOSPHOR-RXNdeoxyadenosine + phosphate = adenine + deoxy-ribose-1-phosphate
ADDALT-RXNNH3 + deoxyinosine = H2O + deoxyadenosine
DEOXYINOPHOSPHOR-RXNhypoxanthine + deoxy-ribose-1-phosphate = deoxyinosine + phosphate
EC# 2.4.2.-inosine + phosphate = ribose-1-phosphate + hypoxanthine
HYPXPRIBOSYLTRAN-RXNhypoxanthine + PRPP = pyrophosphate + IMP
XANTHOSINEPHOSPHORY-RXNxanthosine + phosphate = ribose-1-phosphate + xanthine
QUINOLINATE-SYNTHA-RXNiminoaspartate + dihydroxy-acetone-phosphate = quinolinate + 2 H2O + phosphate
PYRUVDEH-RXNpyruvate + Coenzyme A + NAD = acetyl-CoA + CO2 + NADH + H+
alpha-ketoglutarate oxidative decarboxylation2-oxoglutarate + Coenzyme A + NAD = succinyl-CoA + CO2 + NADH + H+
GLUCOSAMINE1PACETYL-RXNglucosamine-1P + acetyl-CoA = N-acetyl-glucosamine-1-phosphate + Coenzyme A
PHOSGLUCOSAMINEMUT-RXND-glucosamine-6-phosphate = glucosamine-1P
CYSTATHIONASE-RXNcystathionine + H2O = L-cysteine + homoserine
ALPHA-KETOBUTYRATE-DEHYDROG-RXN2-oxobutanoate + Coenzyme A + NAD = propionyl-CoA + CO2 + NADH
PROPIONYL-COA-CARBOXYLASE-RXNpropionyl-CoA + H2O + ATP + CO2 = D-methylmalonyl-CoA + phosphate + ADP
DIMETHUROPORDEHYDROG-RXNdihydrosirohydrochlorin + NAD = sirohydrochlorin + NADH
GLYMALTOPHOSPHORYL-RXNGlycogens + phosphate = maltotetraose + glucose-1-phosphate
MALDEXPHOSPHORYL-RXNmaltodextrin + phosphate = maltotetraose + glucose-1-phosphate
MALTET-RXNmaltotetraose + H2O = maltotriose + β-D-glucose
ACONITATEHYDR-RXNcis-aconitate + H2O = isocitrate
EC# 1.-.-.-precorrin-3A = precorrin-3B
R342-RXNhydrogenobyrinate a,c-diamide + Co2+ + ATP = cob(II)yrinic acid a,c-diamide + ADP + phosphate
EC# 1.-.-.-cob(II)yrinic acid a,c-diamide + NADH = cob(I)yrinic acid a,c-diamide + NAD
R346-RXN1-amino-propan-2-ol + adenosyl-cobyric acid = adenosylcobinamide
EC# 2.7.-.-adenosylcobinamide + ATP = adenosylcobinamide-P + ADP
EC# 5.-.-.-GDP-4-dehydro-6-deoxy-D-mannose = GDP-4-dehydro-6-L-deoxygalactose
GDPMANMANHYDRO-RXNGDP-mannose + H2O = GDP + mannose
2TRANSKETO-RXNerythrose-4-phosphate + xylulose-5-phosphate = fructose-6-phosphate + glyceraldehyde-3-phosphate
EC# 1.1.1.-acetaldehyde + NADH = ethanol + NAD
PHOSNACMURPENTATRANS-RXNundecaprenyl phosphate + UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminoheptanedioate- D-alanyl-D-alanine = N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminoheptane- D-alanyl-D-alanine-diphosphoundecaprenol + UMP
ADOMET-DMK-METHYLTRANSFER-RXNdemethylmenaquinone + S-adenosyl-L-methionine = menaquinone + S-adenosyl-homocysteine
EC# 2.4.2.-ribose-1-phosphate + adenine = adenosine + phosphate
RXN0-262molybdopterin + GTP = molybdopterin guanine dinucleotide + pyrophosphate
EC# 2.-.-.-adenosylcobinamide-GDP + α-ribazole = adenosylcobalamin + GMP
QUINOLINATE-SYNTHE-MULTI-RXNL-aspartate + O2 + dihydroxy-acetone-phosphate = quinolinate + phosphate + H2O2 + 2 H2O
EC# 1.-.-.-GDP-4-dehydro-6-L-deoxygalactose + NADPH + H+ = guanosine diphosphate fucose + NADP
GLYCOPHOSPHORYL-RXNGlycogens + phosphate = maltodextrin + glucose-1-phosphate
DMK-RXN1,4-dihydroxy-2-naphthoate + polyprenylpyrophosphate = demethylmenaquinone + pyrophosphate + CO2
EC# 1.1.1.-acetoacetyl-CoA + NADH = 3-hydroxybutyryl-CoA + NAD
CDHMSARC-RXNacetyl-CoA + tetrahydrosarcinapterin = 5-methyl-tetrahydrosarcinapterin + CO2 + Coenzyme A + 2 H+
COBINPGUANYLYLTRANS-RXNadenosylcobinamide-P + GTP = adenosylcobinamide-GDP + pyrophosphate
DALADEHYDROG-RXND-alanine + H2O = pyruvate + NH3
EC# 1.8.1.-PAPS + NADPH = SO3 + adenosine 3',5'-bisphosphate + NADP
PHOSPHO-DETHIO-RXNdiethylthiophosphate + H2O = Diethylphosphoric acid + H2S
AMINOPHENOL-NITRITE-REDUCTASE-RXN4-Hydroxyaniline + 3 H2O = hydroquinone + 7 H+ + nitrite + 6 e-
PARATHION-NITRO-REDUCT-RXNparathion + 6 H+ + 6 e- = amino-parathion + 2 H2O
EC# 4.-.-.-chorismate = p-hydroxybenzoate + pyruvate
EC# 4.-.-.-4-amino-4-deoxychorismate = p-aminobenzoate + pyruvate
EC# 4.99.1.-sirohydrochlorin + Fe2+ = siroheme + 2 H+
EC# 4.99.1.1Fe2+ + protoporphyrin IX = 2 H+ + protoheme
EC# 4.99.1.2phenylmercury acetate + H+ = Hg2+ + benzene + acetate
EC# 3.1.4.101-Phosphatidyl-D-myo-inositol = 1,2-diacylglycerol + D-myo-Inositol 1,2-cyclic phosphate
EC# 4.6.1.1ATP = cyclic-AMP + pyrophosphate
EC# 4.5.1.-γ-hexachlorocyclohexane = γ-pentachlorocyclohexane + HCl
EC# 4.5.1.-γ-pentachlorocyclohexane = HCl + 1,3,4,6-tetrachloro-1,4-cyclohexadiene
EC# 4.4.1.12-oxobutanoate + L-cysteine + NH3 = cystathionine + H2O
EC# 4.4.1.8cystathionine + H2O = pyruvate + NH3 + homocysteine
EC# 4.4.1.-homoserine + H2O = 2-oxobutanoate + NH4+ + H2O
EC# 4.3.99.1HCO3- + Cyanate = carbamate + CO2
EC# 4.3.2.3(S)-Ureidoglycolate = urea + glyoxylate
EC# 4.3.2.2adenylo-succinate = fumarate + AMP
EC# 4.3.2.1L-arginino-succinate = L-arginine + fumarate
EC# 4.3.2.25'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole = fumarate + AICAR
EC# 4.3.1.1L-aspartate = fumarate + NH3
EC# 4.3.1.8H2O + 4 porphobilinogen = 4 NH3 + hydroxymethylbilane
EC# 4.6.1.45-enolpyruvyl-shikimate-3-phosphate = phosphate + chorismate
EC# 4.6.1.33-deoxy-D-arabino-heptulosonate-7-phosphate = phosphate + 3-dehydroquinate
EC# 4.2.99.2O-phospho-L-homoserine + H2O = phosphate + L-threonine
EC# 4.2.99.-O-Acetyl-L-homoserine + H2S = homocysteine + acetate
EC# 4.2.99.-L-cysteine + O-phospho-L-homoserine = cystathionine + phosphate
EC# 4.2.99.8O-acetyl-L-serine + H2S = L-cysteine + acetate
EC# 4.2.99.9L-cysteine + O-succinyl-L-homoserine = succinate + cystathionine
EC# 4.2.1.553-hydroxybutyryl-CoA = H2O + crotonyl-CoA
EC# 4.2.1.80H2O + 2-oxopent-4-enoate = 4-hydroxy-2-ketovalerate
EC# 4.2.1.17H2O + trans-Δ2-enoyl-CoA = L-3-hydroxyacyl-CoA
EC# 4.2.1.17methacrylyl-CoA + H2O = 3-hydroxy-isobutyryl-CoA
EC# 4.2.1.22homocysteine + L-serine = H2O + cystathionine
EC# 4.2.1.75hydroxymethylbilane = H2O + uroporphyrinogen-III
EC# 4.2.1.51prephenate = phenylpyruvate + H2O + CO2
EC# 4.2.1.1H2O + CO2 = H2CO3
EC# 4.2.1.804-Carboxy-2-oxo-3-hexenedioate + H2O = 4-Carboxy-4-hydroxy-2-oxoadipate
EC# 4.2.1.46dTDP-D-glucose = H2O + dTDP-4-dehydro-6-deoxy-D-glucose
EC# 4.2.1.333-carboxy-3-hydroxy-isocaproate = 2-D-threo-hydroxy-3-carboxy-isocaproate
EC# 4.2.1.70ribose-5-phosphate + uracil = H2O + pseudouridine 5'-phosphate
EC# 4.2.1.52pyruvate + L-aspartate-semialdehyde = 2 H2O + 2,3-dihydrodipicolinate
EC# 4.2.1.103-dehydroquinate = H2O + 3-dehydro-shikimate
EC# 4.2.1.20indole-3-glycerol-phosphate + L-serine = L-tryptophan + H2O + glyceraldehyde-3-phosphate
EC# 4.2.1.19D-erythro-imidazole-glycerol-phosphate = imidazole acetol-phosphate + H2O
EC# 4.2.1.16L-threonine + H2O = 2-oxobutanoate + H2O + NH3
EC# 4.2.1.3citrate = cis-aconitate + H2O
EC# 4.2.1.962-AMINO-4-OXO-4-ALPHA-HYDROXY-6-(ERYTHRO-1',2',3'-TRIHYDROXYPROPYL)-5,6, 7,8-TETRAHYDROXYPTERIN = H2O + 2-AMINO-4-OXO-6-(1',2',3'-TRIHYDROXYPROPYL)-DIQUINOID-7,8-DIHYDROXYPTERIN
EC# 4.2.1.2malate = fumarate + H2O
EC# 4.2.1.112-phosphoglycerate = phosphoenolpyruvate + H2O
EC# 4.2.1.242 5-amino-levulinate = 2 H2O + porphobilinogen
EC# 4.2.1.92,3-dihydroxy-3-methylvalerate = 2-keto-3-methyl-valerate + H2O
EC# 4.2.1.47GDP-mannose = H2O + GDP-4-dehydro-6-deoxy-D-mannose
EC# 4.2.1.13L-serine + H2O = pyruvate + NH3 + H2O
EC# 4.1.2.9phosphate + xylulose-5-phosphate = H2O + glyceraldehyde-3-phosphate + acetylphosphate
EC# 4.1.2.25dihydro-neo-pterin = glycolaldehyde + 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine
EC# 4.1.2.15phosphoenolpyruvate + erythrose-4-phosphate + H2O = 3-deoxy-D-arabino-heptulosonate-7-phosphate + phosphate
EC# 4.1.2.4deoxyribose-5-phosphate = acetaldehyde + glyceraldehyde-3-phosphate
EC# 4.1.2.13fructose-1,6-bisphosphate = dihydroxy-acetone-phosphate + glyceraldehyde-3-phosphate
EC# 4.1.1.-3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2
EC# 4.1.1.-L-methylmalonyl-CoA = propionyl-CoA + CO2
EC# 4.1.1.65L-1-phosphatidylserine = L-1-phosphatidyl-ethanolamine + CO2
EC# 4.1.1.17L-ornithine = CO2 + putrescine
EC# 4.1.1.4acetoacetate = CO2 + acetone
EC# 4.1.1.19L-arginine = CO2 + agmatine
EC# 4.1.1.712-oxoglutarate + thiamine-pyrophosphate = CO2 + succinate-semialdehyde-thiamine PPi
EC# 4.1.1.364'-phospho-N-pantothenoylcysteine = pantetheine 4'-phosphate + CO2
EC# 4.1.1.32oxaloacetic acid + GTP = CO2 + phosphoenolpyruvate + GDP
EC# 4.1.1.31phosphoenolpyruvate + H2O + CO2 = phosphate + oxaloacetic acid
EC# 4.1.1.33mevalonate-5-PP + ATP = phosphate + CO2 + Δ3-isopentenyl-PP + ADP
EC# 4.1.1.49oxaloacetic acid + ATP = CO2 + phosphoenolpyruvate + ADP
EC# 4.1.1.18L-lysine = CO2 + cadaverine
EC# 4.1.1.11L-aspartate = β-alanine + CO2
EC# 4.1.1.15L-glutamate = CO2 + 4-aminobutyrate
EC# 4.1.1.215'-phosphoribosyl-5-aminoimidazole + ATP + CO2 + H2O = phosphate + phosphoribosyl-carboxy-aminoimidazole + ADP
EC# 4.1.1.37uroporphyrinogen-III = 4 CO2 + coproporphyrinogen III
EC# 4.1.1.481-(o-carboxyphenylamino)-1'-deoxyribulose-5'-phosphate = indole-3-glycerol-phosphate + CO2 + H2O
EC# 4.1.1.23orotidine-5'-phosphate = CO2 + UMP
EC# 4.1.1.20meso-diaminopimelate = CO2 + L-lysine
EC# 4.1.1.74Indolepyruvate = CO2 + indole acetaldehyde
EC# 4.1.1.8oxalyl-CoA = CO2 + formyl-CoA
EC# 4.1.3.174-Carboxy-4-hydroxy-2-oxoadipate = oxaloacetic acid + pyruvate
EC# 4.1.3.-4-hydroxy-2-ketovalerate = acetaldehyde + pyruvate
EC# 4.1.3.-L-glutamine + chorismate = 4-amino-4-deoxychorismate + L-glutamate
EC# 4.1.3.24(3S)-3-Carboxy-3-hydroxypropanoyl-CoA = glyoxylate + acetyl-CoA
EC# 4.1.3.5acetoacetyl-CoA + H2O + acetyl-CoA = Coenzyme A + 3-hydroxy-3-methyl-glutaryl-CoA
EC# 4.1.3.3N-acetylneuraminate = N-acetylmannosamine + pyruvate
EC# 4.1.3.122-keto-isovalerate + acetyl-CoA + H2O = 3-carboxy-3-hydroxy-isocaproate + Coenzyme A
EC# 4.1.3.-4-hydroxy-2-ketovalerate = acetaldehyde + pyruvate
EC# 4.1.3.18pyruvate + 2-oxobutanoate = 2-aceto-2-hydroxy-butyrate + CO2
DXS-RXNpyruvate + glyceraldehyde-3-phosphate = CO2 + deoxyxylulose-5-phosphate
EC# 4.1.3.6citrate = acetate + oxaloacetic acid
EC# 4.1.3.2acetyl-CoA + H2O + glyoxylate = malate + Coenzyme A
EC# 4.1.3.27chorismate + L-glutamine = anthranilate + pyruvate + L-glutamate
EC# 4.1.3.7oxaloacetic acid + acetyl-CoA + H2O = citrate + Coenzyme A
EC# 4.1.3.36O-succinylbenzoyl-CoA = Coenzyme A + 1,4-dihydroxy-2-naphthoate
EC# 4.1.3.1isocitrate = glyoxylate + succinate
EC# 3.8.1.-2,4,5-trichloro-2,5-cyclohexadiene-1-ol + H2O = 2,5-dichloro-2,5-cyclohexadiene-1,4-diol + HCl
EC# 3.8.1.2chloroacetic acid + H2O = glycolate + HCl
EC# 3.8.1.-1,3,4,6-tetrachloro-1,4-cyclohexadiene + H2O = 2,4,5-trichloro-2,5-cyclohexadiene-1-ol + HCl
EC# 3.8.1.51,2-dichloroethane + H2O = HCl + 2-chloroethanol
EC# 3.7.1.-cis,cis-2-Hydroxy-6-oxohepta-2,4-dienoate + H2O = 2-oxopent-4-enoate + acetate
EC# 3.7.1.-2-hydroxy-6-oxo-6-(2-hydroxyphenyl)-hexa-2,4-dienoate + H2O = Salicylate + 2-oxopent-4-enoate + H+
EC# 3.6.1.40H2O + guanosine 3'-diphosphate 5'-triphosphate = phosphate + guanosine 5'-diphosphate,3'-diphosphate
EC# 3.6.1.-dihydroneopterin phosphate = dihydro-neo-pterin + phosphate
EC# 3.6.1.-dihydroneopterin triphosphate = dihydroneopterin phosphate + pyrophosphate
EC# 3.6.1.22H2O + NAD = nicotinamide nucleotide + AMP
EC# 3.6.1.1H2O + pyrophosphate = 2 phosphate
EC# 3.6.1.7H2O + AN ACYL PHOSPHATE = phosphate + a fatty acid
EC# 3.6.1.23H2O + dUTP = pyrophosphate + dUMP
EC# 3.6.1.26CDP-diacylglycerol + H2O = CMP + L-phosphatidate
EC# 3.6.1.31phosphoribosyl-ATP + H2O = phosphoribosyl-AMP + pyrophosphate
EC# 3.6.1.36H2O + ATP = phosphate + ADP
EC# 5.3.1.10H2O + D-glucosamine-6-phosphate = NH3 + fructose-6-phosphate
EC# 3.5.4.3H2O + guanine = NH3 + xanthine
EC# 3.5.4.26H2O + 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine = NH3 + 5-Amino-6-(5'-phosphoribosylamino)uracil
EC# 3.5.4.253 H2O + GTP = pyrophosphate + 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine + formate
EC# 3.5.4.5H2O + deoxycytidine = NH3 + Deoxyuridine
EC# 3.5.4.1H2O + cytosine = NH3 + uracil
EC# 3.5.4.4H2O + adenosine = NH3 + inosine
EC# 3.5.4.10phosphoribosyl-formamido-carboxamide = IMP + H2O
EC# 3.5.4.9H2O + 5,10-methenyl-THF = 10-formyl-THF
EC# 3.5.4.162 H2O + GTP = dihydroneopterin triphosphate + formate
EC# 3.5.4.5H2O + cytidine = NH3 + uridine
EC# 3.5.4.19phosphoribosyl-AMP + H2O = phosphoribosylformiminoAICAR-phosphate
EC# 3.5.4.13H2O + dCTP = NH3 + dUTP
EC# 3.5.3.92 H2O + 2 allantoate = O2 + 2 CO2 + 2 NH3 + 2 ureidoglycine
EC# 3.5.3.4H2O + allantoate = (S)-Ureidoglycolate + urea
EC# 3.5.3.19H2O + (S)-Ureidoglycolate = CO2 + 2 NH3 + glyoxylate
EC# 3.5.3.11H2O + agmatine = urea + putrescine
EC# 3.5.3.1H2O + L-arginine = urea + L-ornithine
EC# 3.5.3.6H2O + L-arginine = NH3 + citrulline
EC# 3.5.2.5H2O + allantoin = allantoate
EC# 3.5.2.12H2O + 1,8-DIAZACYCLOTETRADECANE-2,9-DIONE = N-(6-AMINOHEXANOYL)-6-AMINOHEXANOATE
EC# 3.5.2.6a β-lactam + H2O + A BETA-LACTAM = A SUBSTITUTED BETA-AMINO ACID
EC# 3.5.2.3carbamoyl-L-aspartate = dihydroorotate + H2O
EC# 3.5.1.-pyrazinamide + H2O = pyrazinoic acid + NH3
EC# 3.5.1.42nicotinamide nucleotide + H2O = nicotinate nucleotide + NH3
EC# 3.5.1.19niacinamide + H2O = niacine + NH3
EC# 3.5.1.25H2O + N-acetyl-D-glucosamine-6-phosphate = acetate + D-glucosamine-6-phosphate
EC# 3.5.1.10H2O + 10-formyl-THF = THF + formate
EC# 3.5.1.5H2O + urea = 2 NH3 + CO2
EC# 3.5.1.46H2O + N-(6-AMINOHEXANOYL)-6-AMINOHEXANOATE = 2 6-aminohexanoate
EC# 3.5.1.1L-asparagine + H2O = L-aspartate + NH3
EC# 3.5.1.4niacinamide + H2O = niacine + NH3
EC# 3.5.1.18H2O + N-succinyl-LL-2,6-diaminopimelate = ll-diaminopimelate + succinate
EC# 3.5.1.31H2O + N-formyl-L-methionine = L-methionine + formate
EC# 3.5.1.14H2O + A N-ACYL-L-AMINO ACID = A L-AMINO ACID + a fatty acid
EC# 3.3.1.1H2O + S-adenosyl-homocysteine = homocysteine + adenosine
EC# 3.3.2.3H2O + AN EPOXIDE = A GLYCOL
EC# 3.2.2.4H2O + AMP = ribose-5-phosphate + adenine
EC# 3.2.2.5H2O + NAD = adenosine diphosphate ribose + niacinamide
EC# 3.2.2.14H2O + nicotinamide nucleotide = ribose-5-phosphate + niacinamide
EC# 3.2.2.1nicotinamide ribose + H2O = niacinamide + ribose
EC# 3.2.2.9H2O + S-adenosyl-homocysteine = S-D-Ribosyl-L-homocysteine + adenine
EC# 3.2.1.23H2O + lactose = β-D-galactose + β-D-glucose
EC# 3.2.1.68maltodextrin = maltotetraose
EC# 3.2.1.11,4-α-D-glucan = maltodextrin
EC# 3.2.1.93α,α-trehalose 6-phosphate + H2O = β-D-glucose + glucose-6-phosphate
EC# 3.2.1.28trehalose + H2O = 2 β-D-glucose
EC# 3.1.2.4H2O + 3-hydroxy-isobutyryl-CoA = 3-hydroxy-isobutyrate + Coenzyme A
EC# 3.1.2.-acyl-CoA + H2O = a fatty acid + Coenzyme A
EC# 3.1.1.4Lecithins + phosphatidylcholine + H2O = L-1-lysolecithin + a fatty acid + L-1-lysolecithin
EC# 3.1.1.31D-6-phospho-glucono-δ-lactone + H2O = 6-phospho-gluconate
EC# 3.1.1.24H2O + 3-oxoadipate-enol-lactone = 3-ketoadipate
EC# 3.1.1.45H2O + 4-CARBOXYMETHYLENEBUT-2-EN-4-OLIDE = 4 OXOHEX-2-ENEDIOATE
EC# 3.1.1.1H2O + A CARBOXYLIC ESTER = an acid + an alcohol
EC# 3.1.1.5a 2-acylglycerophosphocholine + H2O + 2-acylglycerophosphocholine = a fatty acid + L-1-glycero-3-phosphocholine
EC# 3.1.8.1H2O + aryl dialkyl phosphate = an aryl alcohol + DIALKYL PHOSPHATE
EC# 3.1.8.1amino-parathion + H2O = 4-Hydroxyaniline + diethylthiophosphate
EC# 3.1.8.1parathion + H2O = diethylthiophosphate + p-nitrophenol
EC# 3.1.7.2guanosine 5'-diphosphate,3'-diphosphate + H2O = pyrophosphate + GDP
EC# 3.1.6.1an aromatic sulfate + H2O + a phenol sulfate = SO42- + a phenol
EC# 3.1.5.1H2O + deoxy-GTP = PPPi + deoxyguanosine
EC# 3.1.4.111-Phosphatidyl-D-myo-inositol 4,5-bisphosphate + H2O = 1,2-diacylglycerol + inositol 1,4,5-trisphosphate
EC# 3.1.4.4Lecithins + phosphatidylcholine + H2O = L-phosphatidate + choline
EC# 3.1.4.46H2O + a glycerophosphodiester = glycerol-3-phosphate + an alcohol
EC# 3.1.4.3Lecithins + phosphatidylcholine + H2O = phosphoryl-choline + 1,2-diacylglycerol
EC# 3.1.3.4H2O + L-phosphatidate = phosphate + 1,2-diacylglycerol
EC# 3.1.3.27L-1-phosphatidylglycerol-phosphate + H2O = L-1-phosphatidyl-glycerol + phosphate
EC# 3.1.3.-H2O + α-ribazole-5'-P = α-ribazole + phosphate
EC# 3.1.3.10H2O + glucose-1-phosphate = phosphate + β-D-glucose
EC# 3.1.3.15L-histidinol-phosphate + H2O = histidinol + phosphate
EC# 3.1.3.11fructose-1,6-bisphosphate + H2O = fructose-6-phosphate + phosphate
EC# 3.1.3.12α,α-trehalose 6-phosphate + H2O = trehalose + phosphate
EC# 3.1.3.2an orthophosphoric monoester + H2O + AN ORTHOPHOSPHORIC MONOESTER = phosphate + an alcohol
EC# 3.1.3.33-phospho-serine + H2O = L-serine + phosphate
EC# 3.1.3.25H2O + 1L-myo-Inositol 1-phosphate = phosphate + myo-inositol
EC# 2.8.3.-propionyl-CoA + succinate = propionate + succinyl-CoA
EC# 2.8.3.9acetoacetyl-CoA + butyrate = acetoacetate + butyryl-CoA
EC# 2.8.3.-acetoacetyl-CoA + acetate = acetoacetate + acetyl-CoA
EC# 2.8.3.5A 3-OXO ACID + succinyl-CoA = A 3-OXO-ACYL-COA + succinate
EC# 2.8.3.63-ketoadipate + succinyl-CoA = 3-ketoadipyl-CoA + succinate
EC# 2.8.1.6sulfur donor + dethiobiotin = biotin
EC# 2.8.1.1cyanide + S2O32- = thiocyanic acid + SO3
EC# 2.7.-.-N-acetylmannosamine + ATP = N-acetyl-D-mannosamine-6-phosphate + ADP
EC# 2.7.9.2H2O + pyruvate + ATP = phosphate + phosphoenolpyruvate + AMP
EC# 2.7.9.1phosphate + pyruvate + ATP = pyrophosphate + phosphoenolpyruvate + AMP
EC# 2.7.8.-2 L-1-phosphatidyl-glycerol = cardiolipin + glycerol
EC# 2.7.8.21,2-diacylglycerol + CDP-choline = Lecithins + phosphatidylcholine + CMP
EC# 2.7.8.13undecaprenyl phosphate + UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysyl-D-alanyl-D-alanine = N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysyl- D-alanyl-D-alanine-diphosphoundecaprenol + UMP
EC# 2.7.8.5CDP-diacylglycerol + glycerol-3-phosphate = L-1-phosphatidylglycerol-phosphate + CMP
EC# 2.7.8.8CDP-diacylglycerol + L-serine = CMP + L-1-phosphatidylserine
EC# 2.7.7.582,3-dihydroxybenzoate + ATP = (2,3-Dihydroxybenzoyl)adenylate + pyrophosphate
EC# 2.7.7.2FMN + ATP = FAD + pyrophosphate
EC# 2.7.7.3pantetheine 4'-phosphate + ATP = dephospho-CoA + pyrophosphate
EC# 2.7.7.18ATP + nicotinate nucleotide = pyrophosphate + deamido-NAD
EC# 2.7.7.10α-D-galactose-1-phosphate + UTP = UDP-galactose + pyrophosphate
EC# 2.7.7.22mannose-1-phosphate + GDP = GDP-mannose + phosphate
EC# 2.7.7.12UDP-D-glucose + α-D-galactose-1-phosphate = glucose-1-phosphate + UDP-galactose
EC# 2.7.7.19(NUCLEOTIDE)(M) + N ATP = (NUCLEOTIDE)(M+N) + N pyrophosphate
EC# 2.7.7.41CTP + L-phosphatidate = CDP-diacylglycerol + pyrophosphate
EC# 2.7.7.4SO42- + ATP = APS + pyrophosphate
EC# 2.7.7.27glucose-1-phosphate + ATP = ADP-D-glucose + pyrophosphate
EC# 2.7.7.23N-acetyl-glucosamine-1-phosphate + UTP = UDP-N-acetyl-D-glucosamine + pyrophosphate
EC# 2.7.7.9glucose-1-phosphate + UTP = UDP-D-glucose + pyrophosphate
EC# 2.7.7.24glucose-1-phosphate + dTTP = dTDP-D-glucose + pyrophosphate
EC# 2.7.7.13alpha-D-Mannose 1-phosphate + GTP = GDP-mannose + pyrophosphate
EC# 2.7.6.32-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine + ATP = 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate + AMP
EC# 2.7.6.5GTP + ATP = guanosine 3'-diphosphate 5'-triphosphate + AMP
EC# 2.7.6.1ATP + ribose-5-phosphate = PRPP + AMP
EC# 2.7.4.6dCDP + ATP = dCTP + ADP
EC# 2.7.4.6dGDP + ATP = deoxy-GTP + ADP
EC# 2.7.4.6dADP + ATP = deoxy-ATP + ADP
DTDPKIN-RXNdTDP + ATP = dTTP + ADP
DUDPKIN-RXNdUDP + ATP = dUTP + ADP
CDPKIN-RXNCDP + ATP = CTP + ADP
UDPKIN-RXNUDP + ATP = UTP + ADP
EC# 2.7.4.2mevalonate-5P + ATP = mevalonate-5-PP + ADP
EC# 2.7.4.9dTMP + ATP = dTDP + ADP
EC# 2.7.4.1Long Chain Polyphosphate + ATP = Long Chain Polyphosphate + ADP
EC# 2.7.4.16thiamine-phosphate + ATP = thiamine-pyrophosphate + ADP
EC# 2.7.4.-ATP + UMP = ADP + UDP
GDPKIN-RXNGDP + ATP = GTP + ADP
EC# 2.7.4.14CMP + ATP = CDP + ADP
EC# 2.7.4.8GMP + ATP = GDP + ADP
EC# 2.7.4.3AMP + ATP = ADP + ADP
EC# 2.7.4.74-amino-5-hydroxymethyl-2-methylpyrimidine-phosphate + ATP = 4-amino-5-hydroxymethyl-2-methylpyrimidine-pyrophosphate + ADP
EC# 2.7.2.-propionyl-P + ADP = ATP + propionate
EC# 2.7.2.2carbamoyl-phosphate + ADP = CO2 + NH3 + ATP
EC# 2.7.2.7butyryl phosphate + ADP = butyrate + ATP
EC# 2.7.2.4L-aspartate + ATP = L-aspartyl-4-P + ADP
EC# 2.7.2.11L-glutamate + ATP = L-glutamate-5-phosphate + ADP
EC# 2.7.2.8N-acetyl-L-glutamate + ATP = N-acetylglutamyl-phosphate + ADP
EC# 2.7.2.33-phosphoglycerate + ATP = 3-phospho-D-glyceroyl-phosphate + ADP
EC# 2.7.2.1acetate + ATP = acetylphosphate + ADP
EC# 2.7.1.2β-D-glucose + ATP = β-D-glucose 6-phosphate + ADP
EC# 2.7.1.26riboflavin + ATP = FMN + ADP
EC# 2.7.1.89thiamine + ATP = thiamine-phosphate + ADP
EC# 2.7.1.50ATP + 4-methyl-5-(β-hydroxyethyl)thiazole = ADP + 4-methyl-5-(β-hydroxyethyl)thiazole phosphate
EC# 2.7.1.49ATP + 4-amino-5-hydroxymethyl-2-methylpyrimidine = ADP + 4-amino-5-hydroxymethyl-2-methylpyrimidine-phosphate
EC# 2.7.1.21thymidine + ATP = dTMP + ADP
EC# 2.7.1.12ATP + gluconate = ADP + 6-phospho-gluconate
EC# 2.7.1.-ATP + pyridoxine = ADP + pyridoxine-5'-phosphate
EC# 2.7.1.35ATP + pyridoxal = ADP + pyridoxal 5'-phosphate
EC# 2.7.1.24dephospho-CoA + ATP = Coenzyme A + ADP
EC# 2.7.1.48uridine + GTP = UMP + GDP
EC# 2.7.1.73inosine + ATP = IMP + ADP
EC# 2.7.1.31glycerate + ATP = 3-phosphoglycerate + ADP
EC# 2.7.1.36mevalonate + ATP = mevalonate-5P + ADP
EC# 2.7.1.7mannose + ATP = mannose-6-phosphate + ADP
EC# 2.7.1.1β-D-glucose + ATP = glucose-6-phosphate + ADP
EC# 2.7.1.95KANAMYCIN + ATP = KANAMYCIN 3'-PHOSPHATE + ADP
EC# 2.7.1.30glycerol + ATP = glycerol-3-phosphate + ADP
EC# 2.7.1.11ATP + fructose-6-phosphate = fructose-1,6-bisphosphate + ADP + H+
EC# 2.7.1.63β-D-glucose + Long Chain Polyphosphate = glucose-6-phosphate + Long Chain Polyphosphate
EC# 2.7.1.71shikimate + ATP = shikimate-3-phosphate + ADP
EC# 2.7.1.15ribose + ATP = ribose-5-phosphate + ADP
EC# 2.7.1.40phosphoenolpyruvate + ADP + H+ = pyruvate + ATP
EC# 2.7.1.39homoserine + ATP = O-phospho-L-homoserine + ADP
EC# 2.7.1.33pantothenate + ATP = 4'-phosphopantothenate + ADP
EC# 2.7.1.6β-D-galactose + ATP = α-D-galactose-1-phosphate + ADP
EC# 2.7.1.25APS + ATP = PAPS + ADP
EC# 2.6.-.-3-hydroxy-4-phospho-hydroxy-α-ketobutyrate + L-glutamate = phospho-hydroxy-threonine + 2-oxoglutarate
EC# 2.6.1.13L-ornithine + 2-oxoglutarate = L-glutamate + L-glutamate γ-semialdehyde
EC# 2.6.1.272-oxoglutarate + L-tryptophan = L-glutamate + Indolepyruvate
EC# 2.6.1.5phenylpyruvate + L-glutamate = L-phenylalanine + 2-oxoglutarate
EC# 2.6.1.-dTDP-4-dehydro-6-deoxy-D-glucose + L-glutamate = TDP-D-fucosamine + 2-oxoglutarate
EC# 2.6.1.523-phospho-hydroxypyruvate + L-glutamate = 3-phospho-serine + 2-oxoglutarate
EC# 2.6.1.422-keto-4-methyl-pentanoate + L-glutamate = L-leucine + 2-oxoglutarate
EC# 2.6.1.57p-hydroxyphenylpyruvate + L-glutamate = L-tyrosine + 2-oxoglutarate
EC# 2.6.1.422-keto-3-methyl-valerate + L-glutamate = L-iso-leucine + 2-oxoglutarate
EC# 2.6.1.45glyoxylate + L-serine = L-glycine + hydroxypyruvate
EC# 2.6.1.9imidazole acetol-phosphate + L-glutamate = L-histidinol-phosphate + 2-oxoglutarate
EC# 2.6.1.17L-glutamate + N-succinyl-2-amino-6-ketopimelate = 2-oxoglutarate + N-succinyl-LL-2,6-diaminopimelate
EC# 2.6.1.16fructose-6-phosphate + L-glutamine = D-glucosamine-6-phosphate + L-glutamate
EC# 2.6.1.362-oxoglutarate + L-lysine = L-glutamate + allysine
EC# 2.6.1.192-oxoglutarate + 4-aminobutyrate = L-glutamate + succinate semialdehyde
EC# 2.6.1.422-keto-isovalerate + L-glutamate = L-valine + 2-oxoglutarate
EC# 2.6.1.11N-acetylglutamate semialdehyde + L-glutamate = N-α-acetylornithine + 2-oxoglutarate
EC# 2.6.1.9phenylpyruvate + L-glutamate = L-phenylalanine + 2-oxoglutarate
EC# 2.6.1.62S-adenosyl-L-methionine + 8-amino-7-oxononanoate = S-adenosyl-4-methylthio-2-oxobutanoate + 7,8-diaminononanoate
EC# 2.6.1.1L-aspartate + 2-oxoglutarate = oxaloacetic acid + L-glutamate
EC# 2.6.1.66pyruvate + L-valine = L-alanine + 2-keto-isovalerate
EC# 2.5.1.-farnesylfarnesylgeranyl-PP + p-hydroxybenzoate = 3-octaprenyl-4-hydroxybenzoate + pyrophosphate
EC# 2.5.1.22spermidine + S-adenosylmethioninamine = spermine + 5'-methylthioadenosine
EC# 2.5.1.17ATP + cob(I)alamin + H2O = phosphate + pyrophosphate + adenosylcobalamin
EC# 2.5.1.-ATP + cobinamide + H2O = phosphate + pyrophosphate + adenosylcobinamide
HEMEOSYN-RXNprotoheme + trans, trans-farnesyl diphosphate = heme O + pyrophosphate
EC# 2.5.1.10geranyl-PP + Δ3-isopentenyl-PP = pyrophosphate + trans, trans-farnesyl diphosphate
EC# 2.5.1.1dimethylallyl-pyrophosphate + Δ3-isopentenyl-PP = pyrophosphate + geranyl-PP
EC# 2.5.1.19shikimate-3-phosphate + phosphoenolpyruvate = 5-enolpyruvyl-shikimate-3-phosphate + phosphate
EC# 2.5.1.-cob(I)yrinic acid a,c-diamide + ATP + H2O = adenosyl-cobyrinic acid a,c-diamide + phosphate + pyrophosphate
EC# 2.5.1.16putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine
EC# 2.5.1.26a-long-chain-alcohol + 1-ACYL-GLYCERONE 3-PHOSPHATE = a fatty acid + 1-ALKYL-GLYCERONE 3-PHOSPHATE
EC# 2.5.1.92 6,7-dimethyl-8-(1-D-ribityl)lumazine = 4-(1-D-ribitylamino)-5-amino-2,6-dihydroxypyrimidine + riboflavin
EC# 2.5.1.6ATP + L-methionine + H2O = phosphate + pyrophosphate + S-adenosyl-L-methionine
EC# 2.5.1.7UDP-N-acetyl-D-glucosamine + phosphoenolpyruvate = UDP-N-acetyl-3-(1-carboxyvinyl)-D-glucosamine + phosphate
EC# 2.5.1.15p-aminobenzoate + 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate = 7,8-dihydropteroate + pyrophosphate
EC# 2.5.1.31di-trans,poly-cis-decaprenyl diphosphate + Δ3-isopentenyl-PP = pyrophosphate + di-trans,poly-cis-undecaprenyl diphosphate
EC# 2.5.1.34-methyl-5-(β-hydroxyethyl)thiazole phosphate + 4-amino-5-hydroxymethyl-2-methylpyrimidine-pyrophosphate = thiamine-phosphate + pyrophosphate
EC# 2.4.2.3phosphate + uridine = ribose-1-phosphate + uracil
EC# 2.4.2.15ribose-1-phosphate + guanine = phosphate + guanosine
EC# 2.4.2.8pyrophosphate + IMP = PRPP + hypoxanthine
EC# 2.4.2.22xanthine + PRPP = xanthosine-5-phosphate + pyrophosphate
EC# 2.4.2.-phosphoribulosylformimino-AICAR-P + L-glutamine = D-erythro-imidazole-glycerol-phosphate + AICAR + L-glutamate
EC# 2.4.2.4phosphate + thymidine = deoxy-ribose-1-phosphate + thymine
EC# 2.4.2.9PRPP + uracil = pyrophosphate + UMP
EC# 2.4.2.7PRPP + adenine = pyrophosphate + AMP
EC# 2.4.2.21